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Creators/Authors contains: "Yan, Lin"

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  1. Free, publicly-accessible full text available June 1, 2026
  2. Free, publicly-accessible full text available January 1, 2026
  3. Free, publicly-accessible full text available January 1, 2026
  4. This research explores a novel paradigm for preserving topological segmentations in existing error-bounded lossy compressors. Today's lossy compressors rarely consider preserving topologies such as Morse-Smale complexes, and the discrepancies in topology between original and decompressed datasets could potentially result in erroneous interpretations or even incorrect scientific conclusions. In this paper, we focus on preserving Morse-Smale segmentations in 2D/3D piecewise linear scalar fields, targeting the precise reconstruction of minimum/maximum labels induced by the integral line of each vertex. The key is to derive a series of edits during compression time; the edits are applied to the decompressed data, leading to an accurate reconstruction of segmentations while keeping the error within the prescribed error bound. To this end, we developed a workflow to fix extrema and integral lines alternatively until convergence within finite iterations; we accelerate each workflow component with shared-memory/GPU parallelism to make the performance practical for coupling with compressors. We demonstrate use cases with fluid dynamics, ocean, and cosmology application datasets with a significant acceleration with an NVIDIA A100 GPU. 
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  5. Existing error-bounded lossy compression techniques control the pointwise error during compression to guarantee the integrity of the decompressed data. However, they typically do not explicitly preserve the topological features in data. When performing post hoc analysis with decompressed data using topological methods, preserving topology in the compression process to obtain topologically consistent and correct scientific insights is desirable. In this paper, we introduce TopoSZ, an error-bounded lossy compression method that preserves the topological features in 2D and 3D scalar fields. Specifically, we aim to preserve the types and locations of local extrema as well as the level set relations among critical points captured by contour trees in the decompressed data. The main idea is to derive topological constraints from contour-tree-induced segmentation from the data domain, and incorporate such constraints with a customized error-controlled quantization strategy from the SZ compressor (version 1.4). Our method allows users to control the pointwise error and the loss of topological features during the compression process with a global error bound and a persistence threshold. 
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  6. Merge trees are a type of topological descriptors that record the connectivity among the sublevel sets of scalar fields. They are among the most widely used topological tools in visualization. In this paper, we are interested in sketching a set of merge trees using techniques from matrix sketching. That is, given a large set T of merge trees, we would like to find a much smaller set of basis trees S such that each tree in T can be approximately reconstructed from a linear combination of merge trees in S. A set of high-dimensional vectors can be approximated via matrix sketching techniques such as principal component analysis and column subset selection. However, until now, there has not been any work on sketching a set of merge trees. We develop a framework for sketching a set of merge trees that combines matrix sketching with tools from optimal transport. In particular, we vectorize a set of merge trees into high-dimensional vectors while preserving their structures and structural relations. We demonstrate the applications of our framework in sketching merge trees that arise from time-varying scientific simulations. Specifically, our framework obtains a set of basis trees as representatives that capture the “modes” of physical phenomena for downstream analysis and visualization. 
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  7. Existing error-bounded lossy compression techniques control the pointwise error during compression to guarantee the integrity of the decompressed data. However, they typically do not explicitly preserve the topological features in data. When performing post hoc analysis with decompressed data using topological methods, preserving topology in the compression process to obtain topologically consistent and correct scientific insights is desirable. In this paper, we introduce TopoSZ, an error-bounded lossy compression method that preserves the topological features in 2D and 3D scalar fields. Specifically, we aim to preserve the types and locations of local extrema as well as the level set relations among critical points captured by contour trees in the decompressed data. The main idea is to derive topological constraints from contour-tree-induced segmentation from the data domain, and incorporate such constraints with a customized error-controlled quantization strategy from the SZ compressor (version 1.4). Our method allows users to control the pointwise error and the loss of topological features during the compression process with a global error bound and a persistence threshold. 
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  8. Abstract Atmospheric rivers (ARs) are long, narrow regions of water vapor in the Earth's atmosphere that transport heat and moisture from the tropics to the mid‐latitudes. ARs are often associated with extreme weather events in North America and contribute significantly to water supply and flood risk. However, characterizing ARs has been a major challenge due to the lack of a universal definition and their structural variations. Existing AR detection tools (ARDTs) produce distinct AR boundaries for the same event, making the risk assessment of ARs a difficult task. Understanding these uncertainties is crucial to improving the predictability of AR impacts, including their landfall areas and associated precipitation, which could cause catastrophic flooding and landslides over the coastal regions. In this work, we develop an uncertainty visualization framework that captures boundary and interior uncertainties, i.e., structural variations, of an ensemble of ARs that arise from a set of ARDTs. We first provide a statistical overview of the AR boundaries using the contour boxplots of Whitaker et al. that highlight the structural variations of AR boundaries based on their nesting relationships. We then introduce the topological skeletons of ARs based on Morse complexes that characterize the interior variation of an ensemble of ARs. We propose an uncertainty visualization of these topological skeletons, inspired by MetroSets of Jacobson et al. that emphasizes the agreements and disagreements across the ensemble members. Through case studies and expert feedback, we demonstrate that the two approaches complement each other, and together they could facilitate an effective comparative analysis process and provide a more confident outlook on an AR's shape, area, and onshore impact. 
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  9. Abstract We present SN 2023zaw—a subluminous (Mr= −16.7 mag) and rapidly evolving supernova (t1/2,r= 4.9 days), with the lowest nickel mass (≈0.002M) measured among all stripped-envelope supernovae discovered to date. The photospheric spectra are dominated by broad Heiand Ca near-infrared emission lines with velocities of ∼10,000−12,000 km s−1. The late-time spectra show prominent narrow Heiemission lines at ∼1000 km s−1, indicative of interaction with He-rich circumstellar material. SN 2023zaw is located in the spiral arm of a star-forming galaxy. We perform radiation-hydrodynamical and analytical modeling of the lightcurve by fitting with a combination of shock-cooling emission and nickel decay. The progenitor has a best-fit envelope mass of ≈0.2Mand an envelope radius of ≈50R. The extremely low nickel mass and low ejecta mass (≈0.5M) suggest an ultrastripped SN, which originates from a mass-losing low-mass He-star (zero-age main-sequence mass < 10M) in a close binary system. This is a channel to form double neutron star systems, whose merger is detectable with LIGO. SN 2023zaw underscores the existence of a previously undiscovered population of extremely low nickel mass (<0.005M) stripped-envelope supernovae, which can be explored with deep and high-cadence transient surveys. 
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  10. Abstract We study a magnitude-limited sample of 36 broad-lined type Ic supernovae (SNe Ic-BL) from the Zwicky Transient Facility Bright Transient Survey (detected between 2018 March and 2021 August), which is the largest systematic study of SNe Ic-BL done in literature thus far. We present the light curves (LCs) for each of the SNe and analyze the shape of the LCs to derive empirical parameters, along with the explosion epochs for every event. The sample has an average absolute peak magnitude in therband of M ¯ r , max = 18.51 ± 0.15 mag. Using spectra obtained around peak light, we compute expansion velocities from the Feii5169 Å line for each event with high enough signal-to-noise ratio spectra, and find an average value of v ph ¯ = 16 , 100 ± 1100 km s−1. We also compute bolometric LCs, study the blackbody temperature and radii evolution over time, and derive the explosion properties of the SNe. The explosion properties of the sample have average values of M ¯ Ni = 0.37 0.06 + 0.08 M , M ¯ ej = 2.45 0.41 + 0.47 M , and E ¯ K = ( 4.02 1.00 + 1.37 ) × 10 51 erg. Thirteen events have radio observations from the Very Large Array, with eight detections and five non-detections. We find that the populations that have radio detections and radio non-detections are indistinct from one another with respect to their optically inferred explosion properties, and there are no statistically significant correlations present between the events’ radio luminosities and optically inferred explosion properties. This provides evidence that the explosion properties derived from optical data alone cannot give inferences about the radio properties of SNe Ic-BL and likely their relativistic jet formation mechanisms. 
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